scatrans.qc.unspliced_global

scatrans.qc.unspliced_global#

scatrans.qc.unspliced_global(adata, spliced_key='spliced', unspliced_key='unspliced', warn_threshold=0.5)[source]#

Calculate the global fraction of unspliced reads across all cells. Generates a warning if the fraction is abnormally high (e.g., > 50-60%), which could indicate nuclear enrichment or genomic DNA contamination.